Virus Genome Toolkits

基因组编号	毒株名称	引用编号	病毒类型	物种名称	采样国家	采样时间	宿主	序列长度	发布时间	物种ID	种名	属名	科名	数据源	提交者	提交者单位	有效碱基数量	有效碱基百分比
OEAV16010520	SARS-CoV-2/Ovis aries/NGA/CV4326.DC8BB.1/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), and surface glycoprotein (S) genes, partial cds; ORF3a protein (ORF3a) and envelope protein (E) genes, complete cds; membrane glycoprotein (M) gene, partial cds; ORF6 protein (ORF6) gene, complete cds; and ORF7a protein (ORF7a), ORF8 protein (ORF8), and nucleocapsid phosphoprotein (N) genes	ON564666	RNA viruses	Severe acute respiratory syndrome coronavirus 2	Nigeria	2021-07-21	Ovis aries	29279	2022-05-21	2697049	Severe acute respiratory syndrome-related coronavirus	Betacoronavirus	Coronaviridae	NCBI Virus/Genbank	Ogunsanya,O., Sijuwola,E.A., Saibu,F., Oluniyi,P.E., Happi,A. and Happi,C.T.	Molecular Biology and Genomics, African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Redeemer's University, Akoda, Ede, Osun State 234001	17539	59.90
OEAV16010521	SARS-CoV-2/Ovis aries/NGA/CV4327.DC8BB.1/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), and surface glycoprotein (S) genes, partial cds; ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), and ORF6 protein (ORF6) genes, complete cds; ORF7a protein (ORF7a) and ORF7b (ORF7b) genes, partial cds; ORF8 protein (ORF8) gene, complete cds; and nucleocapsid phosphoprotein (N) gene	ON564667	RNA viruses	Severe acute respiratory syndrome coronavirus 2	Nigeria	2021-07-22	Ovis aries	29318	2022-05-21	2697049	Severe acute respiratory syndrome-related coronavirus	Betacoronavirus	Coronaviridae	NCBI Virus/Genbank	Ogunsanya,O., Sijuwola,E.A., Saibu,F., Oluniyi,P.E., Happi,A. and Happi,C.T.	Molecular Biology and Genomics, African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Redeemer's University, Akoda, Ede, Osun State 234001	18010	61.43
OEAV16010522	SARS-CoV-2/Ovis aries/NGA/CV4328.DC8BB.1/2021 ORF1ab polyprotein (ORF1ab) gene, complete cds; ORF1a polyprotein (ORF1ab) gene, partial cds; surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), and ORF6 protein (ORF6) genes, complete cds; ORF7a protein (ORF7a) and ORF7b (ORF7b) genes, partial cds; and ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes	ON564668	RNA viruses	Severe acute respiratory syndrome coronavirus 2	Nigeria	2021-07-07	Ovis aries	29796	2022-05-21	2697049	Severe acute respiratory syndrome-related coronavirus	Betacoronavirus	Coronaviridae	NCBI Virus/Genbank	Ogunsanya,O., Sijuwola,E.A., Saibu,F., Oluniyi,P.E., Happi,A. and Happi,C.T.	Molecular Biology and Genomics, African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Redeemer's University, Akoda, Ede, Osun State 234001	25407	85.27
OEAV16010523	SARS-CoV-2/Ovis aries/NGA/CV4330.DC8BB.1/2021 ORF1ab polyprotein (ORF1ab) gene, complete cds; ORF1a polyprotein (ORF1ab) gene, partial cds; surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), and ORF6 protein (ORF6) genes, complete cds; ORF7a protein (ORF7a) and ORF7b (ORF7b) genes, partial cds; and ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes	ON564669	RNA viruses	Severe acute respiratory syndrome coronavirus 2	Nigeria	2021-07-12	Ovis aries	29719	2022-05-21	2697049	Severe acute respiratory syndrome-related coronavirus	Betacoronavirus	Coronaviridae	NCBI Virus/Genbank	Ogunsanya,O., Sijuwola,E.A., Saibu,F., Oluniyi,P.E., Happi,A. and Happi,C.T.	Molecular Biology and Genomics, African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Redeemer's University, Akoda, Ede, Osun State 234001	25132	84.57
OEAV16010524	SARS-CoV-2/Ovis aries/NGA/CV4332.DC8BB.1/2021 ORF1ab polyprotein (ORF1ab) and ORF1a polyprotein (ORF1ab) genes, partial cds; surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), and ORF6 protein (ORF6) genes, complete cds; ORF7a protein (ORF7a) and ORF7b (ORF7b) genes, partial cds; and ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes	ON564670	RNA viruses	Severe acute respiratory syndrome coronavirus 2	Nigeria	2021-07-15	Ovis aries	29806	2022-05-21	2697049	Severe acute respiratory syndrome-related coronavirus	Betacoronavirus	Coronaviridae	NCBI Virus/Genbank	Ogunsanya,O., Sijuwola,E.A., Saibu,F., Oluniyi,P.E., Happi,A. and Happi,C.T.	Molecular Biology and Genomics, African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Redeemer's University, Akoda, Ede, Osun State 234001	24459	82.06
OEAV16010525	SARS-CoV-2/Ovis aries/NGA/CV4333.DC8BB.1/2021 ORF1ab polyprotein (ORF1ab) gene, complete cds; ORF1a polyprotein (ORF1ab) gene, partial cds; surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), and ORF6 protein (ORF6) genes, complete cds; ORF7a protein (ORF7a) and ORF7b (ORF7b) genes, partial cds; and ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes	ON564671	RNA viruses	Severe acute respiratory syndrome coronavirus 2	Nigeria	2021-07-15	Ovis aries	29798	2022-05-21	2697049	Severe acute respiratory syndrome-related coronavirus	Betacoronavirus	Coronaviridae	NCBI Virus/Genbank	Ogunsanya,O., Sijuwola,E.A., Saibu,F., Oluniyi,P.E., Happi,A. and Happi,C.T.	Molecular Biology and Genomics, African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Redeemer's University, Akoda, Ede, Osun State 234001	24083	80.82

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